Int J Biol Sci 2009; 5(2):205-214. doi:10.7150/ijbs.5.205
Identifications of SUMO-1 cDNA and Its Expression Patterns in Pacific White Shrimp Litopeanaeus vannamei
1. Dept of Human Nutrition, Food and Animal Sciences, University of Hawaii at Manoa, Honolulu, HI 96822, USA.
2. Dept of Molecular Biosciences and Bioengineering, University of Hawaii at Manoa, Honolulu, HI 96822, USA.
3. Department of Biochemistry, Faculty of Science, Prince of Songkla University, Songkhla, 90112, Thailand.
4. Center for Genomics and Bioinformatics Research, Prince of Songkla University, Songkhla, 90112, Thailand.
Laoong-u-thai Y, Zhao B, Phongdara A, Ako H, Yang J. Identifications of SUMO-1 cDNA and Its Expression Patterns in Pacific White Shrimp Litopeanaeus vannamei. Int J Biol Sci 2009; 5(2):205-214. doi:10.7150/ijbs.5.205. Available from http://www.ijbs.com/v05p0205.htm
Small ubiquitin-like modifiers (SUMO) work in a similar way as ubiquitin to alter the biological properties of a target protein by conjugation. A shrimp SUMO cDNA named LvSUMO-1 was identified in Litopenaeus vannamei. LvSUMO-1 cDNA contains a coding sequence of 282 nucleotides with untranslated regions of 37 bp at 5'-end and 347 bp at 3'-end, respectively. The deduced 93 amino acids exhibit 83% identity with the Western Honeybee SUMO-1, and more than 65% homologies with human and mouse SUMO-1. LvSUMO-1 mRNA is expressed in most L. vannamei tissues with the highest level in hepatopancrease. The mRNA expression of LvSUMO-1 over development stages in L. Vammamei is distinguished by a low level in nauplius stage and relatively high level in postlarva stage with continuous expression until juvenile stage. The LvSUMO-1 protein and its conjugated proteins are detected in both cytoplasm and nucleus in several tissues. Interestingly, LvSUMO-1 mRNA levels are high in abdominal muscle during the premolt stage, wherein it has significant activities of protein degradation, suggesting its possible role in the regulation of shrimp muscle protein degradation.
Keywords: Invertebrate, Small ubiquitin-like modifiers, Sumoylation, RT-PCR, mRNA, Gene expression